That is a plothole I've been waiting Kishimoto to explain someday....
The turtle that scolded Lee was with no doubt a summon, since it could talk and then puffed away. If Lee knew it and it presented Gai its because he has the summon scroll.
Yet we have never seen him use it... so yeah... its more like suppositions but with more bases than saying Gai can't use Ninjutsu when it has only been stated that Lee is the only one that cant.